Fusion event
HBV-MYH1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
TTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGC| |AACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTA
End
10398062/10494745 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1253/Upstream/2307741; hsa-mir-10226/Downstream/1587154;
Upstream sequence
TTTCAACTTCACCTTCAAGTTCACGAACCTACAAGAAGATGGACATTTTAAGGACATTCATTTGACGAATTTCTACTTCTTCACATGACCCACATACTTC
Downstream sequence
TTCTACTCTGCTTTATATGTAGTTTTTAATGCCCTAGTTCAGTTTTCCTTattatgagcttttgggcatgagggaatagctctccctcatctcagtatgc
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.