Fusion event
HBV-ZNF318 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CTAAGCAGGCTTTCACTTTCTCGCCAACTTACAAGGCCTTTCTGTGTAAACAATATCTGCACCTTTACCCCGTTGCCCGGCAACGGTCAGGTCTCTGCCA| |AGTGTTTGCTGACGCAACCCCCACTGGATGGGGCTTGGCCATAGGCCATCGGCGCATGCGTGGAACCTTTGTGGCTCCTCTGCCGATCCATACTGCGGAA
End
43307993/43340255 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10398/Upstream/1606645; hsa-mir-10524/Downstream/94287;
Upstream sequence
gagtggatcccgagggacaatagataataAATGGCTCAACCATCAGGTCagtcatgggcacctccatgaaaaacacgtccctgaaatcctgagagatttc
Downstream sequence
CAGCTTTTTCAGGGGAGTTCCTACCCTCAGAGAGTTGGTCTTCTAATTTCTCAGAGACCTTGTCATCCTCCTTTACTTCTTTCACAGCCTTTGCCTTTTT
Fujimoto, A., et al. Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer. Nat Genet ,2016,48(5): 500-509.