Fusion event
HBV-RBM33 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GAATTTGGAGCTTCTGTGGAGTTACTCTCTTTTTTGCCTTCTGACTTCTTTCCTTCTATTCGAGATCTCCTCGACACCGCCTCTGCTCTGTATCGGGAGG| |CCTTAGAGTCTCCGGAACATTGTTCACCTCACCATACAGCACTCAGGCAAGCTATTCTGTGTTGGGGTGAGTTGATGAATCTGGCCACCTGGGTGGGAAG
End
155443949/155651255 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10399/Upstream/4217616; hsa-mir-153-2/Downstream/1923081;
Upstream sequence
TCACTCCCTGTTGGCTCATGGAGCCCAGAGGTAGAGCCCCAGGAAGCCACACCAGGGGACCTAAGTTGTCACCAGATGAAATCTATCTGACATCCTAGGA
Downstream sequence
cacaacttgattggtggttttgttgggtccagaattttagatttgagtttatttttgtaagatttttggcggtattgttgtgttttctggcatccagatc
Fujimoto, A., et al. Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer. Nat Genet ,2016,48(5): 500-509.