Fusion event
HBV-MARK1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTAGACGACGAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAATCTCA| |ATGTTAGTATCCCTTGGACTCATAAGGTGGGAAACTTTACTGGGCTTTATTCTTCTACTGTACCTGTCTTTAATCCTGAGTGGCAAACTCCCTCCTTTCC
End
220821613/220648271 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/447652; hsa-mir-1182/Downstream/3608769;
Upstream sequence
TAAACTTATGGTATAATTATATAAAATATCACTTTACTGTGAAAGAACCCCCAAAAAGTTGTTTACATGGTTGGTTTCCACATTGGGGAAGTTACCAAAC
Downstream sequence
TACAGTTTAAGAGTCTGCAAGGGTAGTTTTCCACCTAGTTCCCAAATCCTCAGCAGAAAGAACCTTACCTGCTTAGTGATAACTAGATCTTTTTTATTTG
Fujimoto, A., et al. Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer. Nat Genet ,2016,48(5): 500-509.