Fusion event
HBV-LOC100422352 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
AGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACTTTTTCACCTCTGCCTA| |ATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTATAAAGAATTTGGAGCTTCTG
End
30643899/30490966 (Hg38)
Nearest miRNA
hsa-mir-1244-3/Upstream/4616887; hsa-let-7i/Downstream/11832734;
Upstream sequence
TCAAAACAGCTTCCTAAGCTGGAGTATGGGCCTTTTAAGCTAATGCAATTTGTCTTCTTTGGCCTTTTAGTAGAACTTCTTCTGCTCCAAAATTAAATTG
Downstream sequence
ATCTTCTTAAATAGGGCAGAATGGGGAGCAAGGATGGCTTCTGCTTATCAAGGGATTAGACAAGCACAGGTCCTGCTTTTATCACTCGGACATTATCTTG
Fujimoto, A., et al. Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer. Nat Genet ,2016,48(5): 500-509.