Fusion event
HBV-chr4 integration
Detection method
PCR and Sanger sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CCAAGGTCTTACATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAGGACTGGGAGGAGTT| |GGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCA
End
63879681/63013963 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/2091279; hsa-mir-1243/Downstream/3262861;
Upstream sequence
aaattttactacatgatctaacagtcatacccatgatttgatctttgttccaaggctacatcagacggtcactgccctaatttgtagagaaatatttcca
Downstream sequence
acaatctgaaaaagaattcaaggacataatcccattttaaacagcgacaagtgaaataaaatatctgggaataaacttaaccaacaaagtgaaagatttc
Fujimoto, A., et al. Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity. Nat Commun ,2015,6: 6120.