Fusion event
HBV-chr17 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
HBVgp4 precore/core protein
Integrated sequence
GGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGT| |CCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTT
End
60408830/62331469 (Hg38)
Nearest miRNA
hsa-mir-10226/Upstream/2288364; hsa-mir-1250/Downstream/612746;
Upstream sequence
TGAATGTGATGATGGATGAAGTTAAAAATGTTACAGGTGAGTGAGATGTTACAGTAAATACTACATTGTGTGATCTTAAAGTTTTATATGGAACTATATT
Downstream sequence
TTTAACACAATAATGTTTCTTCCactcatttatttaacaattatttatagagtatttaccacatgccaggcattgttccaggcatataggctacatcagt
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.