Fusion event
HBV-chr10 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
HBVgp4 precore/core protein
Integrated sequence
GCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTG| |GGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGA
End
42387856/41852351 (Hg38)
Nearest miRNA
hsa-mir-1265/Upstream/6211099; hsa-mir-107/Downstream/1145212;
Upstream sequence
ctaatggaatcattgaacggaattgaatggaatcatcatcgaatgaattgaatgcaatcatcgaatggtctcgaatggaatcatcttcaaaatgaatgga
Downstream sequence
atggaatcatcgcatagaatcgaatggaattaacatcgaatggactcaaatggaatcaacatcaaacggaatcaaacggaattatcgaatggaatcgaag
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.