Fusion event
HBV-chr18 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
HBVgp1 Polymerase;HBVgp2 pre-S2/S;HBVgp2
Integrated sequence
CTCCTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCA| |AGTCTGTACAGCATCTTGAGTCCCTTTTTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAAACCCTAACAAAACAAAGAGATGGGGTTA
End
38204577/40624613 (Hg38)
Nearest miRNA
hsa-mir-1-2/Upstream/947834; hsa-mir-122/Downstream/4345469;
Upstream sequence
ATGAGAACAAATCCAACCACTAAATATTAAAGAGAAAAAAAGATTTCAAGAAATGGAGTAGAAATGACTTTAGTTAGAATTCTTGCCTTGGCCAATAATT
Downstream sequence
AGAGCAAGATGTTTTGCCCCAATGACGGTGATTAAAAGTATATCCTTTTTTTTGCCCTGAATATTAAACATGTTAGGATATGCATTTTACTTTAATGTGA
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.