Fusion event
HBV-chr11 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
HBVgp4 precore/core protein
Integrated sequence
GTGGTTTCACATTTCTTGTCTCACTTTTGGAAGAGAAACAGTTATAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGACCA| |CCAAATGCCCCTATCCTATCAACACTTCCGGAGACTACTGTTGTTAGACGACGAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGT
End
4676920/4655690 (Hg38)
Nearest miRNA
hsa-mir-210/Upstream/799549; hsa-let-7a-2/Downstream/2579076;
Upstream sequence
CTGAAGGGCTCAGAAAAGTCTGCTCTTCATCCTATATGCTTACATAAGAGGTATATTTATACCTACATAAGAGGTATAAATTTATCAAAGAAGGAAATAT
Downstream sequence
TTCCTTATGCTAGCATAAGTATCACAAAGTCCTTATTAACCATTATGACATCAAGCGGTGTCTCATACAGGTTTCTATTAATTtgctttggatcacttcc
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.