Fusion event
HBV-DDX18 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
Region type
HBVgp3_Xprotein
End
118543232/117785656 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1285-2/Upstream/4064288; hsa-mir-10b/Downstream/9637881;
Upstream sequence
agacgggagaatcacttgagcccaggaggtcaaggctgcagtgaaccatgatcatgccactatactccagcctaagtgtcaaaacaagaccctgtctcaa
Downstream sequence
agaaagaaaaaaaaaagaaGCAGTAAAAGCATAAAAGATTATTGAATATTACAGTAAAAAAAATTGATAAAACTCGGAGTACATCAAAGCCACTTAGGCT
Khoury, J. D., et al. Landscape of DNA virus associations across human malignant cancers: analysis of 3,775 cases using RNA-Seq. J Virol,2013, 87(16): 8916-8926.