Fusion event
HBV-LOC105376755 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Perfect
Reference genome
AY800389.1;AY800390.1;AY800391.1;AY800392.1
End
196312463/195447739 (Hg38)
Nearest miRNA
hsa-mir-10b/Upstream/6314628; hsa-mir-1244-1/Downstream/11335495;
Upstream sequence
AGCCTCCCAAAGTGCTGGGGTTACGGGCATGAGGCACCACGCCCAGCTGGAAT
Junction sequence
AGCCTCCCAAAGTGCTGGGGTTACGGGCATGAGGCACCACGCCCAGCTGGAATTACAGCCTCCTAGTACAAAGACCTTTCACCTCATC
* Color:
Human Sequence
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Virus Sequence
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Overlapped sequence
/
Unknown sequence
Ding, D., et al. Recurrent targeted genes of hepatitis B virus in the liver cancer genomes identified by a next-generation sequencing-based approach. PLoS Genet ,2010,8(12): e1003065.