Fusion event
HBV-chr11:q12.1 integration
Detection method
Alu PCR and sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
61874693/62107221 (Hg38)
Nearest miRNA
hsa-mir-129-2/Upstream/228943; hsa-let-7a-2/Downstream/459790;
Upstream sequence
cacattaaaaaagtaaaaagaaacagataaaagtaattatatattttatttaacccaacatataaaaaatattatttcaacgtatggtcaacccaaaaat
Downstream sequence
atattaataagatattttactttttttaaaaaacaaggccttcaaaattaattggtattttacacttaaaacacattccgatttgcatgctaaattttta
Jiang, S., et al. Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One ,2012, 7(9): e40363.