Fusion event
HBV-chr7:q34 integration
Detection method
Alu PCR and sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
142839619/143142526 (Hg38)
Nearest miRNA
hsa-mir-10399/Upstream/667923; hsa-mir-153-2/Downstream/240160;
Upstream sequence
agaaagaaccttctattttagttcactgagaatttttatactgaactattggattccatcaaataattttctgcatctaAACTATTACCAGAAGATATAT
Downstream sequence
tggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctagctaacacggtgaaaccccgtc
Jiang, S., et al. Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One ,2012, 7(9): e40363.