Fusion event
HBV-chr20:q11.23 integration
Detection method
Alu PCR and sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
35404826/36776423 (Hg38)
Nearest miRNA
hsa-mir-103a-2/Upstream/1322326; hsa-mir-1-1/Downstream/1740140;
Upstream sequence
aagaaaAGAAAAGaaattaatttaaaagtaaacaaattaaaaattaaatttattaataatGCAATGTACACCTTGGGGCAATGGGTAGTAGCAGCAAGGG
Downstream sequence
agacattatagtctgtggcttttttttttttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggcgcgatcttggttcacagcaac
Jiang, S., et al. Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One ,2012, 7(9): e40363.