Fusion event
HBV-chrX:q26.2 integration
Detection method
Alu PCR and sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
133498156/134364126 (Hg38)
Nearest miRNA
hsa-let-7f-2/Upstream/193848; hsa-mir-105-1/Downstream/176059;
Nearest cancer related gene
Upstream sequence
atagtggcttatgcctgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcccagaaggcagatgttgcagtaagccatgatcgtgcca
Downstream sequence
tcactgctgtattccatgtacttgatacatagtaggcactaaataaatattttttgatgactaaatCAATTAATGACATTTGAAGGAAtgtagagaatag
Jiang, S., et al. Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One ,2012, 7(9): e40363.