Fusion event
HBV-CXXC4-AS1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CGACCTTGAGGCATACTTCAAAGACTGTGTGTTTGCTGAGTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTATTAGGAGGCTGTAGGCAT| |AAATTGGTCTGTTCACCAGCACCATGCAAC
End
105576742/104655585 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/3325171; hsa-mir-1243/Downstream/4833113;
Upstream sequence
AGAATCATTGTAAACGTTTTTTAAATCATTCAGTCATCTATTAGTAATGTACCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAA
Downstream sequence
aaaatttgaagacattacataaattaagagagtatggcattggcacttggatagacaattaaatcagggcaaaatagagtccagcagcagattgtcacca
Jiang, S., et al. Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One ,2012, 7(9): e40363.