Expression analysis of TCGA samples
Basic Information
VIS ID
TVIS10016611
Fusion event
HBV-JOSD2 integration
Validated
Yes
Detection method
invPCR+NAH
Data source
Curated
Sample type
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reported year
2008
PubMed ID
Virus Sequence
Virus name
HBV
Reference genome
Not given
Region type
HBV-X
Host Sequence
Chromosome
chr1
Cytoband
q13.33
Reference genome
Not given
Start
End
(Hg38)
Location type
Intronic
Target gene
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Toyoda, H., et al. Impact of hepatitis B virus (HBV) X gene integration in liver tissue on hepatocellular carcinoma development in serologically HBV-negative chronic hepatitis C patients.J Hepatol,2008, 48(1): 43-50.