Basic Information
VIS ID
TVIS10016679
Fusion event
HBV-chr16:q24 integration
Validated
Yes
Detection method
Alu PCR and sequencing
Data source
Curated
Sample type
Tumor
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reported year
2015
PubMed ID
23842217
Virus Sequence
Virus name
HBV
Reference genome
Not given
Start
1512
Host Sequence
Chromosome
chr16
Cytoband
q24
Reference genome
Not given
Start
39673511
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Nearby gene
IRF8 ;
Nearest cancer related gene
IRF8(TSG, -) ;
Reference
Toyoda, H., et al. Impact of hepatitis B virus integration into liver tissue on the efficacy of peginterferon and ribavirin therapy in hepatitis B virus-negative chronic hepatitis C patients. J Clin Gastroenterol,2014, 48(1): 73-79.
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