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VISDB
Viral Integration Site DataBase
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TVIS10016685
Basic Information
VIS ID
TVIS10016685
Fusion event
HBV-chr2:q14.5 integration
Validated
Yes
Detection method
Alu PCR and sequencing
Data source
Curated
Sample type
Tumor
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reported year
2015
PubMed ID
23842217
Virus Sequence
Virus name
HBV
Reference genome
Not given
Start
1811
Host Sequence
Chromosome
chr2
Cytoband
q14.5
Reference genome
Not given
Start
10939406
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Nearby gene
INHBB
;
Reference
Toyoda, H., et al. Impact of hepatitis B virus integration into liver tissue on the efficacy of peginterferon and ribavirin therapy in hepatitis B virus-negative chronic hepatitis C patients. J Clin Gastroenterol,2014, 48(1): 73-79.
Sample Information
×
Sample name
NT_022135
Sample type
Tumor
Gender
Female
CpG Island Information
×
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