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VISDB
Viral Integration Site DataBase
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TVIS10016707
Basic Information
VIS ID
TVIS10016707
Fusion event
HBV-chr21:p13 integration
Validated
Yes
Detection method
Alu PCR and sequencing
Data source
Curated
Sample type
Tumor
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reported year
2015
PubMed ID
23842217
Virus Sequence
Virus name
HBV
Reference genome
Not given
Start
1687
Host Sequence
Chromosome
chr21
Cytoband
p13
Reference genome
Not given
Start
11555
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Toyoda, H., et al. Impact of hepatitis B virus integration into liver tissue on the efficacy of peginterferon and ribavirin therapy in hepatitis B virus-negative chronic hepatitis C patients. J Clin Gastroenterol,2014, 48(1): 73-79.
Sample Information
×
Sample name
NW_001838700
Sample type
Tumor
Gender
Female
CpG Island Information
×
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