Fusion event
HBV-ALB integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TCTTGAATCCCTTTTTACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAAACCCTACTAAAACTAAACGTTGGGGCTACTCCCTTAACTTC| |ATGGGATATGTAATTGGAAGTTGGGGTACCTTACCACAGGAACATATTGTACACAAAATCAAACAATGTTTTCGAAAAATTCCTATAAATAGACCTATTG
End
74286896/73421179 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12113/Upstream/7144251; hsa-mir-1243/Downstream/3152389;
Upstream sequence
gcaaccttgccaacttctgttagttttttagtttttagtaatagccattctgactggtgtgagatggtgcctcactgtggttttgatgagcatttctcta
Downstream sequence
CTAAAAAACATAAATTTCTTTAATCATTTTGCCTCTTTTCTCTGTGCTTCAATTAATAAAAAATGGAAAGAATCTAATAGAGTGGTACAGCACTGTTATT
Chiu, Y. T., et al. Novel pre-mRNA splicing of intronically integrated HBV generates oncogenic chimera in hepatocellular carcinoma. J Hepatol ,2016,64(6): 1256-1264.