Fusion event
HBV-FN1 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTT| |TTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGA
End
216281647/215416924 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10b/Upstream/1658765; hsa-mir-1244-1/Downstream/2483589;
Upstream sequence
ttcaagattgggagggtccatttctatgtttattcaaaagaaaccataaacatcagttctatgggacaattggaccagtttcaATTCCAGTAAGTTCTTC
Downstream sequence
AAATCTAGCCCTGTGGCATAGCCCACCTTTAAAGGAAATGGACTGAACAGCATGGAATTTAGCATGTTTTTGTTCAGGAAGTAAAGAGACTTTGTGTCAG
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.