Fusion event
HBV-chr4 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
ATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGAT| |TAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCAT
End
100063131/99141980 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12113/Upstream/144520; hsa-mir-1243/Downstream/2098815;
Upstream sequence
aatgcccaaatatggagtcagcctggaagaagtccaagtaggttgggaatacctgagacttgtggctggcatctgaaatggaggcagtcctgtgggactg
Downstream sequence
GAAGTTGAGGTAATACACCTTTTACAGTTGAGAGAACAATATCAAATCAAGGATTGTCTGAATTAATTACCAATGTATACCTATATTCTTCTTTAAGGTT
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.