Fusion event
HBV-chr4 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GGGAACAAGATCTACAGCATGGGGCAGAATCTTTCCACCAGCAATCCTCTGGGATTCTTTCCCGACCACCAGTTGGATCCAGCCTTCAGAGCAAACACCG| |CAAATCCAGATTGGGACTTCAATCCCAACAAGGACACCTGGCCAGACGCCAACAAGGTAGGAGCTGGAGCATTCGGGCTGGGTTTCACCCCACCGCACGG
End
100063829/99142678 (Hg38)
Location type
Intron2,Exon8,Exon8,Exon8
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12113/Upstream/145218; hsa-mir-1243/Downstream/2098117;
Upstream sequence
taggaggatgagaggagcgtgaattctgctaaggtgtagccataagctattaccagccgttattctcgaggtcatgagattcataacttccccaattact
Downstream sequence
CTGAATGCGAACTTCATGAGCCTTGGGGGGAGCTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATTTAATA
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.