Fusion event
HBV-chr12 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
ACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGC
End
85125780/84732001 (Hg38)
Nearest miRNA
hsa-let-7i/Upstream/3573540; hsa-mir-1178/Downstream/2013067;
Upstream sequence
TTTAAAGGACTAATTTCCCCATAGATAAAGAGCAGTGACACGTGCTCTATTTTATGCCCTCTTCCTTCCAAACAGGGCCAGGATAAGATACACAGTCACC
Downstream sequence
AAGGACCAGATCCCACGCTCCCACTATCCTGGGCAGACCTGGCCCTCCTTAGGGGCTGGCTCCTCCTGTCGGCCGCAGTCTCAGCCTTGCGCTCACATGG
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.