Fusion event
HBV-chr21 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACT| |TTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAA
End
24032150/22659830 (Hg38)
Nearest miRNA
hsa-let-7c/Upstream/3973666; hsa-mir-155/Downstream/419454;
Upstream sequence
AGCTGCATGAATTTACTTAGTTGACTTGCCTTGGGAGGATAAATCCCCTGATAAAATGGGGCATATGGGGTGAACATTTAATTGGGATTGAGGTGATTTA
Downstream sequence
AGGACAGTAGACCCAGGTAAAAATATATTAAAGAATTAGCCATGTTCATACACAAATACAAATGAAAACGTCCTCTTTGGCTGGCTTTATAGTGAGAGAT
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.