Fusion event
HBV-chrX integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTT| |TTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGA
End
30082501/30064384 (Hg38)
Nearest miRNA
hsa-mir-23c/Upstream/490026; hsa-let-7f-2/Downstream/2519272;
Upstream sequence
TCCCCAATGAAGTATGTGTGTGATAAATTATCCTGCATATCTATATGCACACACCCCTATTCACTTAGCTTATCCAAAAAAACTAGAAGCAGCATAGAGG
Downstream sequence
TAATGACCTTTGAAAAATCTCTGTGCAATTTTACACAAGAACTATGCATTAGTCTCCTTGGTATTTAGATTCCCATGTGTCCTAGGGAGTCTACTATTTC
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.