Fusion event
HBV-OPCML integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTT| |TTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGA
End
132617153/132747258 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7a-2/Upstream/2080455; hsa-mir-4697/Downstream/1151246;
Nearest cancer related gene
Upstream sequence
GCATTGCTTTGCCTTCAGATAATCAGTTCAATGACAGCTGCAATGAGTACTCCTCCTACTATTCAGCATCAGGTGCATCCTCATAGCTTTCCTGTCTTCC
Downstream sequence
tggataataggctctttgatttttatcgggggtaagatgggaaggcactagagggttctgaacaaaggagtgaaatggcctggctaaatttttaacacta
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.