Fusion event
HBV-TF integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
End
133489416/133770572 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7g/Upstream/1784573; hsa-mir-1224/Downstream/597232;
Upstream sequence
gatagcgtcactgcattctagcctgacctacagagtgagaccctgtctATAaataaattaattaattaattaattaaataaCAGTCTCTATAATTCTACT
Downstream sequence
GTAAGTGCACCTGCTCCTCTGTCCCCCTAGATCACTAGATCCTGGTCACTGGTATTCACTTGTATTCAGGGATGCCTTTGTGGAAGTATTATGTACACTG
Target sequence
CAGGTGTCTGGTTGAGAAGGGAGATGTGGCCTTTGTGAAACACCAGACTGTCCCACAGAACACTGGGG
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.