Fusion event
HBV-chr1 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
End
211699508/211526166 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/1902656; hsa-mir-1182/Downstream/551447;
Upstream sequence
CTAACAATCCAGGGGGCTAGACCCTAAGGAGAAACAAGAGCTCACCATTCTTCTGCAGTGCTTTGGCTGTAACTTTCTTGGCCAGTATCATAAACTGACT
Downstream sequence
ttcatgatagtgatggagagtcctatattaaattgccaaatttCTCAGTGATAATTGAAGAAAAGTAAAGAGAATCTAAAGGAACTTAGCTGATATTTTC
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.