Fusion event
HBV-FN1 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
End
216261859/215397136 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10b/Upstream/1638977; hsa-mir-1244-1/Downstream/2503377;
Upstream sequence
CAGAGGAGACACTATTCCCCTCTCTTCCTATTTGGCTTATAAATCACAATTCACACCAGTCCTGTGGCTACTTGTATATCTTTATCTGTCTGCTTTGCTT
Downstream sequence
CTGGGGTGGTGCTCCTCTCCCAGGAGACTGTGAGCACTCCAGTGTCAGGGTTTGCCTCCAGATGCAAGTTTGTTGGTGGAGACAATGCTATGCAGAAAGA
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.