Fusion event
HBV-chr14 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
End
44951544/44482341 (Hg38)
Nearest miRNA
hsa-mir-208a/Upstream/7529861; hsa-mir-1185-1/Downstream/3278654;
Upstream sequence
ATATATGTTATAATTAATACTACAAAACTGCTCCAATATTACAGAATGAGGAATAAACTGAAAGGATTAATTCATCTGGAAAACTTTTTACAGAGAGAGT
Downstream sequence
ctagatcttttgactctgctcatccttaaaatgtttgtgcccacctgtcttttcaccttacaattcttccttaatgtttaaatttagtctcataaattta
Target sequence
tcactagtgtttccttctaaaaacattgttctcccttgacttctctaacatcatccaaaaataaagatatttatttcccatctctttta
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.