Fusion event
HBV-chr8 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
End
112376926/111364697 (Hg38)
Nearest miRNA
hsa-mir-12123/Upstream/6880143; hsa-mir-10400/Downstream/1278796;
Upstream sequence
cgagtagctgggaAGTATAGGTGCCTGGCCAACATGGAATGTTGACAAAAATAGTCCAGACTATACTTATAGCTCCTAGGGCTAAACATACGTCTGTGCG
Downstream sequence
cacacagcatggggatcctgggcctagcccacaaagccattttttcctcctacacttccaggtctgtggtgggaagggctgccttgaagacctatgacat
Target sequence
tcctttgaaacaatgggctggactgtaccttggccctttttagtgatgactggagcggctgggacgcagagcaccaattccctaggctg
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.