Fusion event
HBV-chr12 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Upstream sequence
GGAACAGAGGGGAAGTCACCTCCCCAAATAACTTCTGAGGGATGGGAATGGAGCCTCCTGCCCTGCAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCA
Downstream sequence
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Target sequence
ttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagNNNNNNNNNNNNN
Sung, W. K., et al. Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma. Nat Genet,2012, 44(7): 765-769.