Fusion event
HBV-FN1 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
ACTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTTATCATCTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATC| |AAGGTATGTTGCCCGTTTGTCCTCTAATTCCAGGATCCTCAACAACCAGCACGGGACCATGCCGGACCTGCATGACTACTGCTCAAGGAACCTCTATGTA
End
216299548/215434825 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10b/Upstream/1676666; hsa-mir-1244-1/Downstream/2465688;
Upstream sequence
GCTCCTTTCTGTCAAGGTAATACCCATATTGATTGTTTCTGATAAAATACTATGGGGTATAGTTTAGCAGTGAAGCAAAGGTGTCCCTTACAAGGCAAAT
Downstream sequence
TGCAAATAATTGAAGGAAAACGTTACATTTGCATTTCTCCTTTTCCCAAAATTATGGAATTTTCTTCATGTGAATATTGACGTACATATTTTTTTCCTTT
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.