Fusion event
HBV-chr4 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTT| |CAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAGCCTTAGAGTCTCCTGAGCATTGTTCACCTCACCATACTGCACTCAGGCAAGCAAT
End
100063835/99142684 (Hg38)
Location type
Intron2,Exon8,Exon8,Exon8
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12113/Upstream/145224; hsa-mir-1243/Downstream/2098111;
Upstream sequence
tggttgtctatgttttccggttgtattcataaaatctttcccaaattcaagtcctgaagcatttcccctatgttttcttctaggacttttataggtttgg
Downstream sequence
GCGAACTTCATGAGCCTTGGGGGGAGCTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATTTAATAACCTGA
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.