Fusion event
HBV-chr1 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATG| |CAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTT
End
77298215/76832530 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/5764814; hsa-mir-11399/Downstream/227613;
Upstream sequence
ggtagtatgcaccaagatccagaagcatgagggtacccctttggctgcagaataccgagtatactatagtgtagagtatgctgaaatagaagtgtgagag
Downstream sequence
atATATGTGGGGACAAAGTTTTTGAGGGCCTTGAACATCATTTAAAAGAGATTGGAATTTTTATCCTTAAGGTACTAGCTTGTAAACAGAAACTTTAGAG
Yoo, S., et al. A pilot systematic genomic comparison of recurrence risks of hepatitis B virus-associated hepatocellular carcinoma with low- and high-degree liver fibrosis. BMC Med ,2017, 15(1): 214.