Fusion event
HBV-chr17 integration
Detection method
VirusFinder
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAGCCTTAGAGTCTCCTGAGCATTGTTCACCT| |CACCATACTGCACTCAGGCAAGCAATTCTTTGCTGGGGGGAACTAATGACTCTAGCTACCTGGGTGGGTGTTAATTTGGAAGATCCAGCGTCTAGAGACC
End
14633992/14730675 (Hg38)
Nearest miRNA
hsa-mir-1253/Upstream/1187029; hsa-mir-10226/Downstream/520952;
Upstream sequence
aatctcggcccactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctcggattacaggcgcgtgccaccacatctgg
Downstream sequence
aggggtatcgcaggaaagtacaagatgagtctgaaatatcatgccaggaagtgaagaggagtttgaagaatcagggacacatatcaaaaggggcaggagc
Fujimoto, A., et al. Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer. Nat Genet ,2016,48(5): 500-509.