Fusion event
HPV-CACNG7 integration
Detection method
PCR and Sanger sequencing
Disease
Cervical carcinoma (CC)
Quality evaluation
Normal
Integrated sequence
ATGAAAATGATAGTACAGACCTACGTGACCATATAGACTATTGGAAACACATGCGCCTAGAATGTGCTATTTATTACAAGGCCAGAGAAATGGGATTTAA| |ACATATTAACCACCAGGTGGTGCCAACACTGGCTGTATCAAAGAATAAAGCATTACAAGCAATTGAACTGCAACTAACGTTAGAAACAATATATAACTCA
End
54417043/53913789 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7e/Upstream/125016; hsa-mir-10394/Downstream/68518;
Upstream sequence
ccatgaagttgcaatgcgaccttgaacctatattatgttcttaaataaatcttcctgaatttgttcttggattccctcagtattttcctgagtcaatgct
Downstream sequence
aaaaaaaaaaaaaaaaaaagaaaaTCTATACCTCCCAGGGACCACAAAGACCAATTCATTGTAAGAATCCTGGCTCCCCAGACCTCGTCCTCTTTAGGGA
Liu, Y., et al. Comprehensive mapping of the human papillomavirus (HPV) DNA integration sites in cervical carcinomas by HPV capture technology. Oncotarget,2016, 7(5): 5852-5864.