Fusion event
HPV-MACROD2 integration
Detection method
PCR and Sanger sequencing
Disease
Cervical carcinoma (CC)
Quality evaluation
Normal
Integrated sequence
ATGATGCAGAAAAATATAGTAAAAATAAAGTATGGGAAGTTCATGCGGGTGGTCAGGTAATATTATGTCCTACATCTGTGTTTAGCAGCAACGAAGTATC| |CTCTCCTGAAATTATTAGGCAGCACTTGGCCAACCACCCCGCCGCGACCCATACCAAAGCCGTCGCCTTGGGCACCGAAGAAACACAGACGACTATCCAG
End
15079958/15099312 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-103a-2/Upstream/4449617; hsa-mir-1-1/Downstream/3371303;
Upstream sequence
GCCTTCAGGGATATAGGAGTTTTCTTGCAAATGTAAACCCTGAATAGTTTGAAAAATTATGTAGCCATATGAAACAAGAGCATAAGCCATGTGTGATAGG
Downstream sequence
gtgaggatggggccccatgatgggattagtgcccttagaagaagtgcccttataagaagagtaaaacaagaaaaaaatctctctctccacacacctgcaa
Liu, Y., et al. Comprehensive mapping of the human papillomavirus (HPV) DNA integration sites in cervical carcinomas by HPV capture technology. Oncotarget,2016, 7(5): 5852-5864.