Fusion event
HPV-chr20:p12.1 integration
Detection method
PCR and Sanger sequencing
Disease
Cervical carcinoma (CC)
Quality evaluation
Normal
Integrated sequence
TGGAGATACACCTACATTGCATGAATATATGTTAGATTTGCAACCAGAGACAACTGATCTCTACTGTTATGAGCAATTAAATGACAGCTCAGAGGAGGAG| |GATGAAATAGATGGTCCAGCTGGACAAGCAGAACCGGACAGAGCCCATTACAATATTGTAACCTTTTGTTGCAAGTGTGACTCTACGCTTCGGTTGTGCG
End
14875592/14894946 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-103a-2/Upstream/4245251; hsa-mir-1-1/Downstream/3575669;
Upstream sequence
TCATTTTCTATGCTCATTCTGTCTGATCCTGCCTTCTTATATACAAGCCTCATTCAGTAATGGGAGGATAGTAATAGAAAACAGAGGGAACAGTGCTAAT
Downstream sequence
GGGAGACTAGAGGGTGGCAAGAGTTTTGATAAAATTCAGTTCAATAAACTTGTGAATTTAAGAGCATAGAGATTCTATTAACGAGAATGAATAGAAGAAG
Liu, Y., et al. Comprehensive mapping of the human papillomavirus (HPV) DNA integration sites in cervical carcinomas by HPV capture technology. Oncotarget,2016, 7(5): 5852-5864.