Fusion event
HPV-chr13:q22.1 integration
Detection method
PCR and Sanger sequencing
Disease
Cervical carcinoma (CC)
Quality evaluation
Normal
Integrated sequence
ACTCGTAGTGGAAAATCTATAGGTGCTAAGGTACATTATTATTATGATTTAAGTACTATTGATCCTGCAGAAGAAATAGAATTACAAACTATAACACCTT| |CTACATATACTACCACTTCACATGCAGCCTCACCTACTTCTATTAATAATGGATTATATGATATTTATGCAGATGACTTTATTACAGATACTTCTACAAC
End
73869942/73295805 (Hg38)
Nearest miRNA
hsa-mir-1297/Upstream/7077481; hsa-mir-1267/Downstream/4402207;
Upstream sequence
TGGCATGCTCAGATGATTTTCCACCCAAAGATATGAAATCACTTTACCCACAGTCATTACGCCTCCCCACCAGCCCTTGGTACCGCCGGGAGGTCAGTGG
Downstream sequence
AGGTTGACTTTGGCATCTCCAGACTCCCCATGCTGTACCCCTTTGCCTTTGTGATGCCGCTCTCATGATTCCTCAAAGTCGGTTTAATGACCACCTGCCA
Liu, Y., et al. Comprehensive mapping of the human papillomavirus (HPV) DNA integration sites in cervical carcinomas by HPV capture technology. Oncotarget,2016, 7(5): 5852-5864.