Fusion event
HPV-chr1:p13.2 integration
Quality evaluation
Normal
Reference genome
NC_001526.2;AY262282.1
End
113449880/112907258 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/25129; hsa-mir-1182/Downstream/3652766;
Upstream sequence
aggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccgagatcaaaccattgcactccagcctgggcaacaagagtgaaactccgtcgca
Downstream sequence
aaaaaaaaaaaaagaaaagaaaaaagaaaagaGAATCTCTGATTCTGGGACTCATTCCCTGGTGACAGGACCAACGTCCCCCTTGACAGCCATCACCAAG
Hu, Z., et al. Genome-wide profiling of HPV integration in cervical cancer identifies clustered genomic hot spots and a potential microhomology-mediated integration mechanism. Nat Genet,2015, 47(2): 158-163.