Fusion event
HPV-LOC105369496 integration
Disease
Squamous-cell carcinoma (SCC)
Quality evaluation
Normal
End
112570750/112700027 (Hg38)
Nearest miRNA
hsa-mir-10392/Upstream/1186512; hsa-let-7a-2/Downstream/749996;
Upstream sequence
tttagcttttgataaatgtgatttgtctagctgtggacttctctgagtttaacctacttggattaggttgagcctcatagacatgtatgttaaaaaattt
Downstream sequence
tgtcaaatttgtgaatcttttggtcattaattcatcaaatatttttttctgtccctttctttctcttctctttttctgagatttttcttatgcatatact
Hu, Z., et al. Genome-wide profiling of HPV integration in cervical cancer identifies clustered genomic hot spots and a potential microhomology-mediated integration mechanism. Nat Genet,2015, 47(2): 158-163.