Basic Information
VIS ID
TVIS20004963
Fusion event
HPV-chr6:p25.1 integration
Validated
Yes
Detection method
FISH, WGS, RNA-seq, qPCR
Data source
Curated
Sample type
Tumor
Disease
Cervical carcinoma (CC)
Quality evaluation
Normal
Reported year
2014
PubMed ID
24418928
Virus Sequence
Virus name
HPV
Subtype
HPV18
Reference genome
NC_001357.1
Gene
E2/E4
Start
3535
Host Sequence
Chromosome
chr6
Cytoband
p25.1
Reference genome
GRCh37/hg19
Start
4328779
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Liang, W. S., et al. Simultaneous characterization of somatic events and HPV-18 integration in a metastatic cervical carcinoma patient using DNA and RNA sequencing. Int J Gynecol Cancer,2004, 24(2): 329-338.
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