Basic Information
VIS ID
TVIS20005022
Fusion event
HPV-chr8:q13.3 integration
Validated
Yes
Detection method
RS-PCR
Data source
Curated
Sample type
Tumor
Disease
Anal intraepithelial neoplasia (AIN)
Quality evaluation
Normal
Reported year
2005
PubMed ID
16186736
Virus Sequence
Virus name
HPV
Subtype
HPV16
Reference genome
Not given
Start
3184
Host Sequence
Chromosome
chr8
Cytoband
q13.3
Reference genome
Hg16
Start
65818453
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Gagne, S. E., et al. High-resolution analysis of genomic alterations and human papillomavirus integration in anal intraepithelial neoplasia. J Acquir Immune Defic Syndr,2005, 40(2): 182-189.
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