Fusion event
HPV-chr7:p21.1 integration
Detection method
RNA-Seq+RT-PCR
Disease
Squamous-cell carcinoma (SCC)
Reference genome
Not given
End
17444267/17404643 (Hg38)
Nearest miRNA
hsa-mir-339/Upstream/10295857; hsa-mir-10399/Downstream/722577;
Upstream sequence
GGActttactacacgttggaataatctgaagatctataaaaatattgatgccttcctagcactcccagatattctaatttaactggcatgaggtgaaagc
Downstream sequence
tttttgcccattcagtatgatactggctgcgggtttgtcataaacagctcttattttgagatatgttctatcaatacctagtttattgagagtttttacc
Ojesina, A. I., et al. Landscape of genomic alterations in cervical carcinomas. Nature,2014,506(7488): 371-375.