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VISDB
Viral Integration Site DataBase
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TVIS20005242
Basic Information
VIS ID
TVIS20005242
Fusion event
HPV-chr7:q31 integration
Validated
Yes
Detection method
APOT-PCR
Data source
Curated
Sample type
Cell line
Disease
Squamous-cell carcinoma (SCC)
Quality evaluation
Normal
Reported year
2006
PubMed ID
16682952
Virus Sequence
Virus name
HPV
Subtype
HPV18
Reference genome
Not given
Host Sequence
Chromosome
chr7
Cytoband
q31
Reference genome
Not given
Start
111482650
End
(Hg38)
Location type
Intronic
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Peter, M., et al. MYC activation associated with the integration of HPV DNA at the MYC locus in genital tumors.Oncogene ,2006,25(44): 5985-5993.
Sample Information
×
Sample name
IC5
Sample type
Cell line
Gender
Female
CpG Island Information
×
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