Basic Information
VIS ID
TVIS20005246
Fusion event
HPV-chr8:q24.21 integration
Validated
Yes
Detection method
DIPS-PCR
Data source
Curated
Sample type
Tumor
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reported year
2016
PubMed ID
26867494
Virus Sequence
Virus name
HPV
Subtype
HPV18
Reference genome
Not given
Host Sequence
Chromosome
chr8
Cytoband
q24.21
Reference genome
GRCh37/hg19
Start
127993014
End
(Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Nearby gene
MYC(No orient, 426000)
Nearest cancer related gene
MYC(OG, No orient, 426000)
Reference
Chiu, Y. T., et al. Novel pre-mRNA splicing of intronically integrated HBV generates oncogenic chimera in hepatocellular carcinoma. J Hepatol ,2016,64(6): 1256-1264.
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